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Microbial Genomic Epidemiology Laboratory (MiGEL) 🦠 Research on genomic emergence/transmission of pathogens 🔬 University of Pittsburgh @PittTweet/@IDPittStop

Pittsburgh, PA
Joined January 2019
.@vatsalars presenting in her work for genomic surveillance at #IDWeek2024! That’s a wrap for @LabMigel !
Today at 4:15PM @ #IDWeek2024 come hear @vatsalars talk about genomic surveillance for respiratory viruses! @IDPittStop
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Today at 4:15PM @ #IDWeek2024 come hear @vatsalars talk about genomic surveillance for respiratory viruses! @IDPittStop
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Yesterday, @LeeHarrisonID presented findings on EDS-HAT and evidence for real-time genomic surveillance at #IDWeek2024 @IDPittStop
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Our own Kady Waggle talking about the methods and economics of real-time prospective WGS surveillance at our hospital #IDWeek2024 Read her pre-print here: medrxiv.org/content/10.1101/…
Coming to #IDWeek2024? Check out 3 of our sessions! - WGS symposia moderated by our own @SundermannAJ along with @costisifri. Presentations by @LabMigel head @LeeHarrisonID, @liliabbo, & Emily Snavely - WGS of respiratory virus by @vatsalars - WGS cost analysis by Kady Waggle!
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Coming to #IDWeek2024? Check out 3 of our sessions! - WGS symposia moderated by our own @SundermannAJ along with @costisifri. Presentations by @LabMigel head @LeeHarrisonID, @liliabbo, & Emily Snavely - WGS of respiratory virus by @vatsalars - WGS cost analysis by Kady Waggle!
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Today our lab celebrated two of our students’ graduations, Hunter & Shurmin! 🎉
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Today @vatsalars is presenting her work on respiratory virus WGS surveillance at @PittPubHealth Dean’s Day!
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🚨NEW pre-print from Waggle et al in @LabMigel ➡️We describe the laboratory, sequencing, and bioinformatics methods for our in-house bacterial WGS surveillance program 💰We calculate (including FTEs) WGS to be ~$91/isolate = feasible & affordable! 📄: medrxiv.org/content/10.1101/…
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.@LabMigel had our lab safety meeting lead by our lab manager, Kady Waggle Don’t mouth pipette!
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It’s a busy day in @LabMigel! Our real-time WGS surveillance of healthcare-associated COVID-19 is up and running
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Today @LabMigel and the @UPMC Presbyterian Infection Prevention team met to discuss the past 2-years of real-time WGS surveillance for outbreak detection & intervention We shared our findings, analysis plans, wins, and next steps of EDS-HAT for our successful collaboration
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Today marks two years that @LabMigel has performed real-time, prospective whole genome sequencing surveillance for major HAI bacterial pathogens as part of our EDS-HAT program at @IDPittStop
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