We are pleased to announce the immediate release of MRtrix 3.0.8.
This is a bug fix release, fixing issues with MRView on macOS, amongst other issues. We recommend users upgrade as soon as practical.
All the best from the MRtrix3 team!
mrtrix.org/2025/10/22/mrtrix…
We're proud to announce the release of MRtrix 3.0.7!
This is a bug fix release, to address a couple of issues that became apparent after the 3.0.5 release. We recommend users upgrade as soon as practical.
All the best from the MRtrix3 team!
mrtrix.org/2025/07/28/mrtrix…
It's been a while, but we're proud to announce the release of MRtrix 3.0.5!
This is a bug fix release. We recommend users upgrade as soon as practical.
All the best from the MRtrix3 team!
mrtrix.org/2025/05/08/mrtrix…
Registrations are now open for our next @MRtrix3 workshop in Brisbane, Australia, 30 June - 3 July 2025!
See link for full details: mrtrix.org/2025/02/03/mrtrix…
@KingsImaging
@NIFAus
@UQ_News
@TheFlorey
@unimelb
@UAntwerpen
@DiffusionISMRM
@KU_Leuven
An incredible piece of work from Marlene Tahedl, which will hopefully be very useful to many researchers using diffusion MRI and @MRtrix3 in particular!
rdcu.be/d9Q7f
Our next @MRtrix3 workshop will be held in Brisbane, Australia, 30 June - 3 July 2025! See link for full details: mrtrix.org/2025/02/03/mrtrix…
@KingsImaging
@NIFAus
@UQ_News
@TheFlorey
@unimelb
@UAntwerpen
@DiffusionISMRM
@KU_Leuven
the MRtrix3 team retweeted
After @MRtrix3 was a finalist at the Australian Museum @eurekaprizes ceremony, I conducted an interview with @ARDC_AU to speak about my involvement with that project and my opinions on the research software ecosystem.
🧠 A Senior Research Officer at @TheFlorey, Dr Robert Smith @Lestropie has worked on developing sophisticated processing and reconstruction techniques for analysing image data, especially diffusion magnetic resonance imaging (#MRI) with a view to advance #BrainScience. One project he's been invovled in is #MRtrix3, a freely available #software package used for guiding clinical decision making in #neuroscience.
"For instance, it’s used to determine surgical candidates and margins for brain tissue resection," Rob reports. One of their core analysis pipelines has been applied across a very broad spectrum of neurological disorders. The software was also used to investigate the effects of microgravity on brain microstructure and morphology.
In the 5 years since the article decribing MRtrix3was published, 2,000 citations have been recorded. Having a low barrier to access and not requiring registration, though, the software has most certainly seen more usage. There are also nearly 2,000 accounts on the community forum, which is an under-estimate of the user base considering that registration is optional. Seeing the issues and feature requests coming from the community, it's natural for Rob to continually and diligently maintain the software.
"I don’t think that I ever made a conscious decision of 'I’m going to maintain research software' ... When you have a personal investment in software you develop a vested interest in ensuring it does what it claims, does it well, and expands in its capabilities."
Earlier this year, MRtrix3 was named a finalist for the 2024 ARDC-sponsored #Eureka Prize for Excellence in #ResearchSoftware.
"It’s obviously great to have individual software projects recognised for their contribution to research, but for me the key impact of this award is the promotion of research software as a domain worthy of recognition. This prize is one of many steps to recognise software as a reportable and valuable output of research."
🔗 Read more about MRtrix3 and Rob's experience in the latest of our monthly interviews with leading research software engineers (#RSEs) in Australia > ardc.edu.au/article/shaping-…
#ResearchSoftwareAU
the MRtrix3 team retweeted
🧠 A Senior Research Officer at @TheFlorey, Dr Robert Smith @Lestropie has worked on developing sophisticated processing and reconstruction techniques for analysing image data, especially diffusion magnetic resonance imaging (#MRI) with a view to advance #BrainScience. One project he's been invovled in is #MRtrix3, a freely available #software package used for guiding clinical decision making in #neuroscience.
"For instance, it’s used to determine surgical candidates and margins for brain tissue resection," Rob reports. One of their core analysis pipelines has been applied across a very broad spectrum of neurological disorders. The software was also used to investigate the effects of microgravity on brain microstructure and morphology.
In the 5 years since the article decribing MRtrix3was published, 2,000 citations have been recorded. Having a low barrier to access and not requiring registration, though, the software has most certainly seen more usage. There are also nearly 2,000 accounts on the community forum, which is an under-estimate of the user base considering that registration is optional. Seeing the issues and feature requests coming from the community, it's natural for Rob to continually and diligently maintain the software.
"I don’t think that I ever made a conscious decision of 'I’m going to maintain research software' ... When you have a personal investment in software you develop a vested interest in ensuring it does what it claims, does it well, and expands in its capabilities."
Earlier this year, MRtrix3 was named a finalist for the 2024 ARDC-sponsored #Eureka Prize for Excellence in #ResearchSoftware.
"It’s obviously great to have individual software projects recognised for their contribution to research, but for me the key impact of this award is the promotion of research software as a domain worthy of recognition. This prize is one of many steps to recognise software as a reportable and valuable output of research."
🔗 Read more about MRtrix3 and Rob's experience in the latest of our monthly interviews with leading research software engineers (#RSEs) in Australia > ardc.edu.au/article/shaping-…
#ResearchSoftwareAU
the MRtrix3 team retweeted
Congratulations to the @MRtrix3 team on being finalists in the @ARDC_AU #EurekaPrize for Excellence in Research Software! #MRTrix3 is used to study brain development, neurological diseases, and even to plan neurosurgery. Shoutout to the team on an outstanding achievement! #NCRIS
the MRtrix3 team retweeted
Congratulations to Dr Donald Tournier (@jdtournier), Dr Robert Smith (@Lestropie) and the @MRtrix3 Team who are finalists for the 2024 Australian Museum Eureka Prize - #Australia's premier science awards for discovery, invention, communication, innovation and leadership.
the MRtrix3 team retweeted
Congratulations @MRtrix3!
MRtrix has global impact🌏
🧠It's used to study brain development and neurological diseases
🧑⚕️It enables neurosurgeons to perform novel procedures with improved patient outcomes
🚀It's even used by @esa to study effects of space travel
#NCRISImpact
MRtrix3 @MRtrix3 is a finalist in the @ARDC_AU Eureka Prize for Excellence in Research Software.
Learn more: youtu.be/TgcIFnULhns
#EurekaPrizes
the MRtrix3 team retweeted
MRtrix3 @MRtrix3 is a finalist in the @ARDC_AU Eureka Prize for Excellence in Research Software.
Learn more: youtu.be/TgcIFnULhns
#EurekaPrizes
the MRtrix3 team retweeted
#MediaAlert: Australian-led @MRtrix3 team announced as #EurekaPrizes Finalists
Proud to support #MRtrix3, used by scientists and doctors globally to map brain connections with MRI data - to study and treat disease
Congratulations @jdtournier @Lestropie!
australian.museum/get-involv…
the MRtrix3 team retweeted
Replying to @MRtrix3
@MRtrix3 workshop was amazing!
Thank all the speakers and the organizing team!!
@chunhungyeh
Our next MRtrix workshop is less than 4 weeks away! There are still places available if you’re interested – you can sign up via the website 👇
mrtrix.org/2024/01/20/next-m…
The upcoming @MRtrix3 workshop is now open for registrations!
This will be held at Chang Gung University in Taiwan, 1-4 July 2024. See link for full details:
mrtrix.org/2024/01/20/next-m…
@KingsImaging @TheFlorey @unimelb @UAntwerpen @DiffusionISMRM @KU_Leuven
The upcoming @MRtrix3 workshop is now open for registrations!
This will be held at Chang Gung University in Taiwan, 1-4 July 2024. See link for full details:
mrtrix.org/2024/01/20/next-m…
@KingsImaging @TheFlorey @unimelb @UAntwerpen @DiffusionISMRM @KU_Leuven
Our next @MRtrix3 workshop will be held in Chang Gung University, Taoyuan, Taiwan, 1-July 2024!
See link for full details: mrtrix.org/2024/01/20/next-m……
@KingsImaging @TheFlorey @unimelb @UAntwerpen @DiffusionISMRM @KU_Leuven
the MRtrix3 team retweeted
#NewPaper supported by NIF @TheFlorey:
Exploring individual fixel-based white matter abnormalities in epilepsy
doi.org/10.1093/braincomms/f…
@MangorPedersen @heathpardoe @Lestropie @ingridscheffer
the MRtrix3 team retweeted
Important study comparing filtering approaches - SIFT2 by @MRtrix3 @Lestropie seems to finish on top. For binary, metrics for SIFT2 do not make sense IMO (as it is not designed to discard any streamlines)
1/5 Working with whole brain tractograms is challenging. Don't miss this new paper to learn more about why 👉 sciencedirect.com/science/ar… Another difficult thing is to compare different #tractography algorithms 👇
Another @MRtrix3 workshop successfully delivered - thanks to @dchristiaens for organising! 👏
And now onto some more serious business... 🍻





















