@ProfTomEllis

Synthetic Biology & Synthetic Genomics @ Imperial College London and the Sanger Institute. Bilingual in English and DNA. D-/L-

London
Joined January 2011
Co-Grown - an exciting biodesign opportunity to work with our lab and our collaborators on materials that grow with self-pigmentation. See below for competition details.
2
5
31
2,679
They must be saving Ed's prize for expansion microscopy
BREAKING NEWS The 2026 #NobelPrize in Physiology or Medicine has been awarded to Karl Deisseroth, Peter Hegemann and Georg Nagel “for their discoveries concerning light-gated ion channels and optogenetics.”
3
5
1
92
12,164
Tom Ellis retweeted
If you're a Londoner working in Engineering Biology, there's only one place to be on 15 Oct, because the new season of @london_synbio events starts at UCL! Come for everything that's great about SynBio: theory, hardware, wet lab experiments, and of course networking w/ free food
3
4
5
806
Tom Ellis retweeted
ANNOUNCING THE 2026 WOLF PRIZE LAUREATES IN CHEMISTRY The 2026 Wolf Prize in Chemistry is awarded to Pascal Mayer, Shankar Balasubramanian and David Klenerman for developing impactful, low-cost, next generation DNA sequencing methods for genomic medicine. Their work helped transform DNA sequencing into a technology capable of operating at extraordinary speed and scale. Balasubramanian and Klenerman pioneered a massively parallel sequencing approach that contributed to a million-fold improvement in sequencing speed and cost, helping make it possible to sequence a human genome for under $200. Mayer played a pivotal role in turning those breakthroughs into a practical high-throughput sequencing system, integrating the chemistry, microfluidics, optics and computational components needed to make the technology work at scale. Today, the sequencing platform that grew from this work forms the technological foundation for more than 90% of global sequencing data, powering major advances in genomics and precision medicine. Congratulations to the 2026 Wolf Prize Laureates in Chemistry! @Cambridge_Uni @universitedestrasbourg – at West University Place, TX
8
190
25
907
1,028,811
Tom Ellis retweeted
Very happy to announce that our team @GoogleDeepmind has pushed the boundaries of generative biology, achieving the successful synthesis of AI-designed proteins that are both functional and watermarked. This proof-of-concept watermarking of the building blocks of life is enabled by SynthID Bio, our new protein watermarking method. It is designed to safeguard the new era of AI-powered generative biology and strengthen global biosecurity. You can read my thoughts here on why watermarking AI-designed proteins is an important research breakthrough: nitter.cf/pushmeet/status/210531…
89
292
115
2,293
664,682
This is the only scenario where applauding when the plane lands safely is socially acceptable btw.
WATCH: Moment the FLYDUBAI plane landed in Saudi Arabia safely
31
290
9
7,535
191,349
Tom Ellis retweeted
All this renaming has me thinking Synthetic Biology could be more awesome. From now on we do
9
10
3
72
8,360
Do you use GFP to measure protein abundance? Be very careful. Our new bioRxiv preprint shows that, under translation inhibition, fluorescence can stop tracking how much reporter protein is actually there. Please share widely. 1/5
1
30
135
9,121
Tom Ellis retweeted
Strangely this isn't a bigger story. Apparently OAI was setting up a bio cagematch at Ginko between a Stanford prof and Codex about who designs better folding experiments. Seems they wanted a spectacle a la Kasparov/Deep Blue - but then got worried about the optics. Not sure we needed this? theinformation.com/articles/…
3
15
2
112
16,691
Tom Ellis retweeted
Programmable large-DNA writing in the human genome sciencedirect.com/science/ar…
1
28
1
144
7,029
Just release a preprint before submitting to a gate keeping overpriced glam journals. Problem solved wrt using AI chatbots to help with paper review. AI companies scooping & having merky attributions is a different & serious problem.
Just the Editor-in-Chief of Nature advising scientists not to share their data and findings with external AI model companies.
3
7
2
84
17,074
Tom Ellis retweeted
hyrox is just takeshi's castle for people going through midlife crisis
151
7,139
496
42,853
1,113,421
Tom Ellis retweeted
wait what how does the first lady of china speak better american than the first lady of america
1,303
4,516
447
38,731
7,167,232
Tom Ellis retweeted
Replying to @Burghoff
Strongly agree, for many research applications you're literally doing something for the first time anyone ever has. The fixed effort of making it robotic far exceeds the marginal benefit. Still in a lot of bio there are core protocols that are repeated a lot in different contexts
2
1
17
1,339
There's going to be so much cheap lab automation equip. on LabX in 2 to 3 years, when either all these new self-driving AI wetlabs fold, or they realise that current lab automation equip. sucks for what they need to do.
6
9
2
124
8,166
Tom Ellis retweeted
$451 million into two AI biotech companies in a single morning. @enveda closed a $311M Series E led by @CatalioCapital. Their PRISM platform identifies biologically active molecules made by plants, microbes, and the human body, then ranks them by therapeutic potential so Enveda's chemists can turn the best ones into oral medicines. Since 2019 that approach has produced 17 development candidates, three now in human trials. Two of those read out positively this year. ENV-294 improved eczema severity by 85% on average after 42 days in Phase 1b, with more data coming at EADV on October 1. ENV-308, based on a molecule the body releases during intense exercise, was well tolerated in 88 volunteers with a very clean GI profile, and it's being developed to help people keep weight off after stopping GLP-1s. ENV-6946 for inflammatory bowel disease is in Phase 1. Enveda has now raised more than $845M total, and @georgecpetro of Catalio joins the board. The syndicate is basically a who's who across tech and healthcare: Durable Capital Partners, ICONIQ, @lightspeedvp, Surveyor Capital, @TRowePrice, Digitalis Ventures, Alderline Group, and a sovereign wealth fund as new investors, alongside existing backers @BaillieGifford, @PremjiInvest, FPV Ventures, @trueventures, @KinnevikAB, Dimension, Lifeforce Capital, and @Lux_Capital. Alex Gorsky, former J&J CEO and now at ICONIQ and Alderline, is part of it too. @Basecamp_Res closed an oversubscribed $140M Series C led by @S32_VC, with Andy Conrad, former CEO of Verily, joining the board. Their EDEN models are trained on the Trillion Gene Atlas, biological data collected through benefit-sharing partnerships in more than 30 countries and built with partners including @nvidia, @AnthropicAI, @PacBio, and Ultima Genomics. First target is in vivo cell therapy: pairing EDEN-designed DNA with large serine recombinases to write complex sequences into a patient's cells inside the body, which could take a lot of the cost out of today's cell therapies. André Hoffmann, Vice-Chairman of @Roche, invested personally, and Richard Pearce joins from @biogen as Chief Business Officer. That round brought in Anthology Fund, @CatalioCapital, European Tech Collective, Firebrand River Capital, Inception Fund, King Philanthropies, NATO Innovation Fund, @nvidia, PostScriptum, Redalpine, @RockefellerFdn, Singular, Sovereign AI, and @trueventures. Reading the two announcements back to back, both companies are built on the same bet. The best starting material for new medicines is what evolution already made, and AI can finally read it at scale. Enveda cites an estimate that 99% of nature's chemical diversity has never been examined. That's the part I keep coming back to. Also kind of wild: Catalio and True Ventures are in both rounds, announced the same day. Congratulations to @viswacolluru, Nadeem Sarwar, Michael Charlton, Doug Maslin, Soumoditya Dey, and the whole Enveda team, and to @glen_gowers, Richard Pearce, and everyone at Basecamp Research.
🤖 Made with AI
6
1
21
2,796
Neat but not that exciting. Claude did lots of tedious sequence inspection and identified some probably-functional biology in a poorly-studied bacteriophage. There are many such systems, no evidence this one is worth the effort needed to make it into "the next CRISPR" or anything
Claude has discovered a previously unknown enzyme system hidden in the DNA of bacteriophages. Beside the enzyme’s gene sits a long array of repeating DNA—a structure that looks somewhat similar to CRISPR. We don’t yet understand what this system does, but only a handful of known systems share its features, and all of them are able to cut, copy, and paste DNA. Historically, the discovery of such programmable systems has helped revolutionize medicine. CRISPR, for instance, is now the foundation of genetic medicines. But it will take much more work to learn what this system does, and whether it can be put to similar use. Read more: anthropic.com/news/claude-di…
3
25
5
209
10,138
Use reward-guided search in a generative model's latent space to design high-affinity protein binders to proteins and carbohydrates. @DidiKieran @sacdallago @karsten_kreis @ArashVahdat @PierceOgdenJ
2
20
101
6,007