Kathryn Campbell retweeted
📢A super exciting new course covering both lab skills 👩🔬 AND bioinformatics 💻- you won't find a course like this anywhere else!
Learn full-length 16S sequencing with PacBio! 🧬
📅 April 8-9 (Lab), April 15-16 (Online Bioinformatics)
🔗 Register now: genomics.ed.ac.uk/event/full…
Kathryn Campbell retweeted
Master Variant Analysis! Join our online course (17–20 March 2025) to learn germline & somatic variant calling with the GATK pipeline. Hands-on training with Edinburgh Genomics experts!
📅 17–20 March 2025 | 🖥️ Online |
🔗 Register now: genomics.ed.ac.uk/event/vari…
Kathryn Campbell retweeted
🎓 We just wrapped up another successful R for Biologists!
Participants learned R basics, data manipulation, and creating publication-ready plots. 📊
Missed out? Register now for the next session: genomics.ed.ac.uk/event/r-fo…
#RforBiologists #Bioinformatics
Kathryn Campbell retweeted
🎉 Start 2025 with new skills!
Join our DNA Library Preparation for Short-Read Sequencing course.
📅 6th Feb 2025
📍 Edinburgh Genomics
🔬 Hands-on lab work, MiSeq demo, and more!
Limited spots—register now: genomics.ed.ac.uk/event/dna-…
#Genomics #DNASequencing #HappyNewYear2025 🎆
Kathryn Campbell retweeted
2024 was an incredible year at Edinburgh Genomics! 🎉
Thank you for your support as we pushed boundaries in #sequencing, advanced #bioinformatics, and impactful #training courses.
🎥 Check out our ‘2024 #Wrapped’ video to celebrate with us!
Here’s to an even brighter 2025! 🚀
Kathryn Campbell retweeted
🚀 Kickstart your coding journey in 2025 with our introductory courses this January! 📅
✅ R for Biologists
✅ Intro to Python
✅ Linux for Genomics
📍 Perfect for biologists & genomic scientists—boost your research skills!
🔗 Sign up now: genomics.ed.ac.uk/service/tr…
Kathryn Campbell retweeted
My first PhD chapter has been published in @PLOSPathogens! Is incubation period weirdness behind the lack of temporal signal in some rabies virus datasets? (probably not) dx.plos.org/10.1371/journal.…
Kathryn Campbell retweeted
Last week, we hosted our amazing Long-Read Bioinformatics course, covering QC, mapping, de novo assembly, structural variation, and methylation. 🧬
We hope you loved it!
Missed out? Register for the next session here: genomics.ed.ac.uk/event/intr…
#Bioinformatics #Genomics #longread
Kathryn Campbell retweeted
We love this photo of our wonderful EdGe members, Ana and Helen, showing off our lab #Sustainability award from @EdSust! 💚
We're incredibly proud to work toward a #sustainable future and thrilled to see our team’s hard work recognised on this journey!
#SustainabilityInScience
Kathryn Campbell retweeted
Today we're talking about #Kinnex - unlocking the full potential of microbiome research with @PacBio #16S #HiFi #Sequencing 🌟
With PacBio Revio and Kinnex we offer groundbreaking 16S rRNA full gene sequencing, advancing microbiome research beyond traditional short-reads
Kathryn Campbell retweeted
Did you know that microwaving to burst open cells can be a useful method of DNA extraction, especially for cheap, rapid, and high-throughput workflows?
It can be used as a step within the extraction process to improve cell lysis, and also as the main cell lysis process to produce a crude DNA extract for PCR.
An early example was published by Goodwin & Lee (1993), and was used on a wide range of taxa across different kingdoms of life:
⭐Goodwin & Lee (1993). Microwave miniprep of total genomic DNA from fungi, plants, protists and animals for PCR. Biotechniques, 15(3), 438-441.
buff.ly/3UJf1IJ
Since then, researchers have regularly published variations or instances of this method for specific applications. Below are a few examples 👇
⭐DNA extraction from human samples (saliva, blood, semen) for forensics:
Taglia et al. (2022). Development of a microwave-based extraction for forensic biological samples. Forensic Science International: Synergy, 5, 100291.
buff.ly/3UGJcjY
⭐High throughput DNA extraction from barley seeds for genotyping, using microwaving in an alkaline buffer followed by neutralisation with a Tris-HCl buffer, allowing processing of thousands of seeds per day:
Von Post et al. (2003). A high-throughput DNA extraction method for barley seed. Euphytica, 130, 255-260.
buff.ly/40DZj5C
⭐Microwaving dry fungal spores to pop them open prior to direct PCR:
Ferreira et al. (1996). PCR from fungal spores after microwave treatment. Fungal Genetics Reports, 43(1), 25-26.
buff.ly/3UCKgFu
⭐Microwaving ground mosquitos, in which it was found to produce comparable results to much more time-consuming extraction methods:
Firmansyah et al. (2023). Comparison of 3 DNA extraction methods for extracting DNA from an adult Culex quinquefasciatus (Diptera: Culicidae). Journal of Insect Science, 23(5), 15.
buff.ly/40DZjCE
Image shows a microwave oven, CC BY-SA Mk2010, buff.ly/2K169f4
Do you use microwaving as part of your DNA extractions? If you do, we'd love to hear about how it works for you!
Kathryn Campbell retweeted
🎃Happy Halloween from Edinburgh Genomics! 🎃
Found something spooky or paranormal in your lab? Send it to us for sequencing! We'll turn that ghost into a genome 👻🧬
#Halloween #sequencing #genome
Kathryn Campbell retweeted
🎉We’re celebrating one year of @PacBio Revio at Edinburgh Genomics!🎉
⭐️Learn about Revio, and the amazing and varied work our team has been carrying out in this short thread 🧵
(plus a super special photo at the end!)
🧵1/8
Kathryn Campbell retweeted
Thrilled to announce we have received the Silver Social Responsibility and #Sustainability Lab Award from @EdSust! 🎉
Huge credit to our incredible team for their dedication to advancing @EdinburghUni's mission of creating a more #sustainable world through all our activities🌍💚
























