James X. Li (@VisuMap) header
James X. Li (@VisuMap) profile picture

James X. Li

@VisuMap

VisuMap Technologies. Discovering knowledge by visualization.

 Calgary, Canada
Visumap.com
Joined September 2010
  • Tweets432
  • Following290
  • Followers192
154Media
Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)Photo by James X. Li (@VisuMap)
This year’s chemistry laureates Demis Hassabis and John Jumper have developed an AI model, AlphaFold2, to solve a 50-year-old problem: predicting proteins’ complex structures. Check out two examples of protein structures determined using AlphaFold2. First up, a bacterial enzyme that causes antibiotic resistance. The structure is important for discovering ways of preventing antibiotic resistance. Animation: ©Terezia Kovalova/The Royal Swedish Academy of Sciences #NobelPrize
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新华网在B站关于姜萍的视频“探索数学世界只是姜萍的PlanB”已经被删除了。
Image from 大漠孤鹰⛓ (@LCA176232)
Image from 大漠孤鹰⛓ (@LCA176232)
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A DNA methylation atlas of normal human cell types | ⁦@Nature⁩ nature.com/articles/s41586-0…

A DNA methylation atlas of normal human cell types

Nature - We describe a human DNA methylome atlas based on deep whole-genome bisulfite sequencing, allowing fragment-level analysis of cell-type-specific markers and providing an essential resource...

nature.com
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With interactive online exploration tool: vigilab.shinyapps.io/anophel…
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James X. Li retweeted
BioTuring (@bioturing) profile picture
BioTuring@bioturing16 Sep 2020
t-SNE has been used extensively in biology, but what are its pros and cons? Join us to hear Dr. Laurens van der Maaten, the inventor of t-SNE, discuss the algorithm, plus what you can and can't conclude from it. Time: 9:00AM (GMT-7), Sep 30 Register now: us02web.zoom.us/webinar/regi…
Image from BioTuring (@bioturing)
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James X. Li retweeted
Brad Loncar (@bradloncar) profile picture
Brad Loncar
@bradloncar31 May 2019
Helen Chen’s reports/statistics on China are legendary. I’m just going to start tweeting her slides.
Image from Brad Loncar (@bradloncar)
Image from Brad Loncar (@bradloncar)
Image from Brad Loncar (@bradloncar)
Image from Brad Loncar (@bradloncar)
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Childhood cerebellar tumours mirror conserved fetal transcriptional programs nature.com/articles/s41586-0…
Image from Nicolas Robine (@notSoJunkDNA)
Image from Nicolas Robine (@notSoJunkDNA)
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Just released bigwig files for Avocao's genomic latent factors: bit.ly/2PrZvhC Easy to load into the genome browser! We're working on semantic labels to make them easier to associate with biological activity. @uwgenome @uwescience
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James X. Li retweeted
Yann LeCun (@ylecun) profile picture
Yann LeCun
@ylecun27 Mar 2019
I am extremely honored to be the recipient of the 2018 ACM A.M. Turing Award, and absolutely delighted to be sharing it with my friends and colleagues Geoffrey Hinton and Yoshua Bengio. NYT:... nytimes.com/2019/03/27/techn…
Turing Award Won by 3 Pioneers in Artificial Intelligence (Published 2019)

Turing Award Won by 3 Pioneers in Artificial Intelligence (Published 2019)

For their work on neural networks, Geoffrey Hinton, Yann LeCun and Yoshua Bengio will share $1 million for what many consider the Nobel Prize of computing.

nytimes.com
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single-cell RNAseq of the developing Arabidopsis root: >4k cells, >4k genes/cell (!!!), 90% of all transcripts detected compared to bulk RNAseq. AND old school, hand drawn cover art for new school, high-tech science cell.com/developmental-cell/…
Image from Michael Raissig @michaelraissig.bsky.social (@MichaelRaissig)
Image from Michael Raissig @michaelraissig.bsky.social (@MichaelRaissig)
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James X. Li retweeted
Vivek Das (@ivivek87) profile picture
Vivek Das@ivivek8718 Mar 2019
A nice read on scalable #SingleCell data analysis, cell composition and . based on #DeepLearning #autoencoder. Comes with bench-marking with other methods of #dimensionreduction for performance. nature.com/articles/s41592-0…
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Our Research Director, Dr Richard Hopkins, presenting the results highlighting the benefits of #VSTs as a platform for improving CART-T therapy at the Keystone’s #Cancerimmunotherapy conference in Whistler. #KScancerimm #Immunotherapy #CARTcell #celltherapy
Image from Tessa Therapeutics (@TessaImmunology)
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Tessa’s Research Director, Dr Richard Hopkins, speaking about the advances of cell therapy at the DIA Singapore Annual Meeting 2019 today. He discussed how Virus Specific T Cells are utilized as a platform to tackle solid tumor in cancer #immunotherapy. #celltherapy #solvecancer
Image from Tessa Therapeutics (@TessaImmunology)
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James X. Li retweeted
TensorFlow (@TensorFlow) profile picture
TensorFlow
@TensorFlow31 Jan 2019
Dive into #deeplearning for genomics using Nucleus and Tensorflow in this post from the Genomics team in Google Brain. Read the post here → bit.ly/2WzW0Jg Get started with the Colab tutorial here → bit.ly/2HGRlSj
Image from TensorFlow (@TensorFlow)
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Today our article is online in @NatImmunol | Immune system before birth more mature than previously thought | integrated #singlecell analysis platform | human fetal intestine | @LUMC_Leiden & @tudelft | go.nature.com/2U4vJjX | #MassCytometry #RNAseq #tcr
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Challenges in unsupervised clustering of single-cell RNA-seq data via @nature go.nature.com/2szNs7p nitter.cf/10xgenomics/status/108…
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#1 of 2018: Immune health> Upshot of @WherryLab, @EJohnWherry @Therealbbengsch study: Tailoring immune therapies to patient’s unique exhausted T cell pool and its individual characteristics @PennIFI @ImmunityCP @ParkerICI @NIAIDFunding @PennMicro
Image from @PennMedBenchmarks (@PennMedBench)
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Using AI to help scientists solve big questions is at the core of DeepMind’s mission. Today we’re delighted to announce our first significant milestone: a successful application of machine learning to the protein folding problem. deepmind.com/blog/alphafold/ #AlphaFold (1/5)
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Check out the accepted papers and interactive explainables from the upcoming #VISxAI workshop at #ieeevis - Program available at visxai.io/program.html Looking forward to all the great talks and discussions in Berlin!
Image from Menna El-Assady (@melassady)
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Deep-learning-based image-activated cell sorting bit.ly/2O0dsVx #NBThighlight
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