PhD candidate @ Johns Hopkins Univ. | Wirtz Lab | Institute of Nano biotechnology (INBT) 🇵🇹
Baltimore, MD
Joined November 2021
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Not the official Science Advances cover of this month, but you can still find it in the current issue!
Check our latest paper where we used 3D-CODA to design assembloids that mimic the complexity of human fallopian tubes.
Paper:science.org/doi/10.1126/scia… – at Baltimore, MD
André Forjaz retweeted
Elana Fertig, Hartland Jackson, Linghua Wang, Deniz G. Olgun, and Sungsik Kim discussed "Spatial Biology and Actionable Tumor Ecosystems: Beyond the Pretty Picture" to close out the AACR Conference on Pancreatic Cancer.
#AACRpan26 @hartjackson @IamLinghua
André Forjaz retweeted
Congrats on the 25th anniversary of @NatureRevCancer . honored to have our paper on 3D Tumor Atlas @theNCI #HTAN included in this special issue. Kudos to my postdoc @Miao__Liu, and congrats to @deniswirtz @SStevenWang @StimulatedRaman @AshleyKiemen
nature.com/nrc/volumes/26/is…
André Forjaz retweeted
3D multi-omics tumour atlases: from technology to biology and clinical translation
Read this Nature Reviews Cancer paper here: nature.com/articles/s41568-0…
André Forjaz retweeted
A detailed protocol for CODA to segment tissue components in histological sections for 3D reconstructions.
Led by colleague Prof. Kiemen @JohnsHopkins
Use this protocol here: nature.com/articles/s41596-0…
André Forjaz retweeted
Excited to share our new tool, out today in @NatureProtocols! CODAvision includes a detailed guide on generating high-quality annotations for segmentation and a graphical user interface to make finetuning easy. Huge shoutout to first author @Valen_mat00s! nature.com/articles/s41596-0…
André Forjaz retweeted
Amazing work!
Excited to share our new tool, out today in @NatureProtocols! CODAvision includes a detailed guide on generating high-quality annotations for segmentation and a graphical user interface to make finetuning easy. Huge shoutout to first author @Valen_mat00s! nature.com/articles/s41596-0…
André Forjaz retweeted
Our weirdly fresh 4D map of hair follicle genesis is finally out in @CellCellPress. It'll make you see spatial more temporally! Brilliant tour-de-force by PhD student Soichiro Asami, with great support from @JEFworks and Luis Garza #devbio #spatialomics
cell.com/cell/fulltext/S0092…
André Forjaz retweeted
3D reconstruction reveals highly conserved vascular network architecture despite phylogenetic diversity spanning >300M years of evolution.
Moer here: biorxiv.org/content/10.64898…
André Forjaz retweeted
Great colleague Rong Fan led a team of experts at Yale, Hopkins, and UCSD to write a review on 3D multi-comics of tissues and tumors.
Check it out: nature.com/articles/s41568-0…
André Forjaz retweeted
Immune remodeling during early pancreatic cancer progression.
Individual immunes cells around PanIN lesions are mapped using CODA
More here: sciencedirect.com/science/ar…
André Forjaz retweeted
Delighted to share our latest review on 3D multi-omics tumor atlases. A major @theNCI #HTAN team work w/ @deniswirtz @AshleyKiemen @StimulatedRaman @SStevenWang, kudos to my phenomenal postdoc @Miao__Liu and co-contributors Jorge, Andre, & Xiaolong, on this team work! 🥰
André Forjaz retweeted
Welcome renowned biologist, @apombo1, who joins @JohnsHopkins as the Bloomberg Distinguished Professor of Genome Biology.
hub.jhu.edu/2026/06/02/genom…
André Forjaz retweeted
From @AshleyKiemen, @deniswirtz, & colleagues, (@JohnsHopkins @HopkinsMedicine): Quantitative 3D histology reveals localized immune remodeling during early pancreatic cancer progression cell.com/cell-press-blue/ful…
#ResearchWithInfinitePotential
André Forjaz retweeted
Blood vessel mapping in 3D in a rhesus macaque embryo.
We used CODA.
More here: biorxiv.org/content/10.64898…
André Forjaz retweeted
The new Issue of @cellpressblue is out today with CODA on the cover! Here you see normal pancreatic ducts in blue with tens of precancerous lesions throughout in red. Read more in our recent article here: cell.com/cell-press-blue/ful…
André Forjaz retweeted
Currently my favorite video from the lab...
Mapping of blood vessels and nerves in whole embryos of rhesus macaque.
They form scale-free fractals of dimensions 3 and 2, independently of development stage.
More here: biorxiv.org/content/10.64898…
André Forjaz retweeted
The vasculature system as mapped by CODA.
Color coded by radius size and Strahler order.
We found that the vasculature for mouse, rhesus macaque, chicken, and turtle have the same scale-free space-filling fractal geometry (D = 3).
Here: biorxiv.org/content/10.64898…
André Forjaz retweeted
So proud of our lab alumnus, @KaustavBera11 (PhD ’22), on joining @PurdueChemE as an Assistant Professor! Excited to see him launch his lab and continue advancing the frontiers of mechanobiology, biomaterials and tissue engineering. Wishing him every success in this new chapter!
André Forjaz retweeted
Big paper coming out soon.
Using AI, we mapped embryos of mice, alligators, turtles, rhesus macaques, and chickens in 3D and at single-cell resolution.
We discovered something truly remarkable...stay tuned!
André Forjaz retweeted
CODA mapping reveals that 100% of fallopian tubes of healthy women contain precancers!
The standard SEE-FIM protocol misses most of them due to undersampling. But our exhaustive assessment reveals that both pre- and postmenopausal women have them.
Here: biorxiv.org/content/10.1101/…