Building things at @PixelgenTech. Chronically curious. Molecular medicine PhD. Formerly: @OlinkProteomics, @scilifelab
Joined October 2015
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- Following280
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Johan Dahlberg retweeted
Exciting times begin with @PixelgenTech launching their first Kit. Read about it more on pixelgen.com/products/
#pixelgen #molecularpixelation #spatialproteomics #singlecell #80plex #immunology #newtechnology
Johan Dahlberg retweeted
Come by and say hi #AGbt2023 #AGBT23 breakfast #PixelgenTechnologies #MolecularPixelation #singleCellProteomics
Johan Dahlberg retweeted
Today we announce the Olink Explore 3072 high throughput #proteomics platform, offering uncompromised data quality with coverage of all major biological pathways. PEA combined with NGS readout on @illumina platforms. Available for pre-order. Read more at hubs.la/H0QRJSp0
Johan Dahlberg retweeted
@scilifelab Uppsala is now the first certified core facility in Europe to run the Olink Explore high-throughput protein biomarker platform. Hear how #proteomics & #genomics interests converged to offer this unique technology to scientists in Sweden olink.com/scilifelab-uppsala…
Johan Dahlberg retweeted
Github + VSCode on your browser = 🤯
Just add "1s" before the ".com", and tada!
Here is an example with our Continual Learning library Continuum:
github1s.com/Continvvm/conti…
Johan Dahlberg retweeted
Come and work in my team at @scilifelab @ngisweden 🎉 Play with genomics, clusters, clouds, @nextflowio pipelines, @nf_core tools, @SeqeraLabs Tower, #MultiQC reporting and more! This is a permanent position - varied backgrounds welcome. Excited to see what we can build 😁
Johan Dahlberg retweeted
📊📒🤯 What in the world... @ProjectJupyter notebooks in @MSExcel:
towardsdatascience.com/pytho…
"Use #Excel as an interactive playground for organizing and visualizing your data, seamlessly switching to Python for more sophisticated tools, such as machine learning or data munging."
Johan Dahlberg retweeted
Olink® Explore #proteomics platform with NGS read-out selected for project to measure proteins in 53,000 individuals from @uk_biobank! Commissioned by a biopharma consortium, this is a major advancement in #proteomics, enhancing the #UKBiobank database: olink.com/prdec2020
Johan Dahlberg retweeted
Our CRISPR-Cas9 off-target sequencing (OTS) paper is out! By amplification-free long read sequencing, we find Cas9 cleavage also in “dark” regions of the human genome. Many thanks to everyone involved, but in particular to first author @idaista doi.org/10.1186/s13059-020-0…
Johan Dahlberg retweeted
Super excited to announce the nf-core/rnaseq version 2.0 release! One of our most used pipelines, we have completely re-written it from the ground up using the new and shiny, modular @nextflowio DSL2 language! 🧙♂️✨
github.com/nf-core/rnaseq/re…
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Johan Dahlberg retweeted
SciLifeLab and Uppsala University are looking to recruit an Associate Senior Lecturer in Scientific Computing, as part of the SciLifeLab Fellows program.
bit.ly/35c9ssR
Johan Dahlberg retweeted
Want to work as a bioinformatician at one of the largest genomics centres in Europe? 👩💻 We have a position open! 🚀
Find out more and apply here: ngisweden.scilifelab.se/2020…
Johan Dahlberg retweeted
Upcoming @scilifelab BiG seminar on Nov 24th 📅 from @ngisweden and @NBISwe
Artem Babaian will talk about Serratus: ultra-rapid discovery of known and unknown coronaviruses in response to the COVID-19 pandemic.
Watch on YouTube or join for fika.. 🥐
ngisweden.scilifelab.se/even…
Johan Dahlberg retweeted
Excited to give an intro to regular expressions at the @scilifelab @ngisweden #coffee_n_code talk tomorrow at 14:00. Aimed at people who sort-of-know what regexes are, but find them a bit terrifying.. 😱
Watch via Zoom or YouTube live-stream. Details: ngisweden.scilifelab.se/even…
Johan Dahlberg retweeted
A great collaborative project between the @scilifelab @ngisweden and @NBISwe facilities, as well as @barncancerfond / @karolinskainst Barntumörbanken (BTB).
We're happy to have been involved in developing the @nf_core Sarek pipeline! See more details at nf-co.re/sarek
New freely available portable workflow for whole-genome sequencing analysis of germline/somatic variants.
Created by the SciLifeLab National Genomics Infrastructure, with first authors @gau & Szilvezter Juhos @Stockholm_Uni @UU_University @karolinskainst
bit.ly/3iVHXrV
Johan Dahlberg retweeted
Our first Coffee 'n Code after the summer break is tomorrow - Compelling data visualization with D3 by @h_i_g_s_c_h
ngisweden.scilifelab.se/even…
Watch on YouTube: youtu.be/UXWgdOSV-y0
Join in with the live-coding! github.com/higsch/coffee_n_c… 👩💻👨💻📈
Johan Dahlberg retweeted
Check out new version update of #Ansible role to deploy @Stack_Storm: stackstorm.com/2020/08/05/an…
Thanks @AmandaMcGuinnes from @AmmeonSolutions for the code contribution!
Johan Dahlberg retweeted
Johan Dahlberg retweeted
Hello Twitter! If you enjoy reading about different sorts of comparisons, then here's a collection of papers on comparisons of #sequencing #technologies 😊
Share, star the repository to show some ❤️ & fork it to contribute.
#pacbio #nanopore #illumina
github.com/Nazeeefa/awesome-…
Johan Dahlberg retweeted
Excited to announce that the NGI has been awarded a grant as part of the @cziscience Essential Open Source for Science program.
We couldn't be more excited for the @nf_core and @nextflowio communities! Find out more in the news article on our new website: ngisweden.scilifelab.se/2020…