Jan Gebauer (@jan_gebauer) header
Jan Gebauer (@jan_gebauer) profile picture

Structural biologist studying interactions in the #ECMatrix at atomic levels #ProteinCrystallography at @UniCologne. Preferred: @JanGebauer@fediscience.org

Köln, Deutschland
Joined October 2013
Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)Photo by Jan Gebauer (@jan_gebauer)
Call for papers is open for the Collection “The Extracellular Matrix” in #BMCMolecularandCellBiology journal!! @SpringerNature Don’t miss this opportunity!
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Get your data out now! 🚀 BMC has a special edition on “The Extracellular Matrix,” and I’m honoured to guest edit. We’re accepting manuscripts on all aspects of ECM, but if you know my background, you’ll know I’m especially excited about structural data and collagens 😉. [1/2]
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BMC has a solid JIF and welcomes all scientifically valid studies—so write up your story now and submit! 📩 DM me if you have questions or check out biomedcentral.com/collection… #ExtracellularMatrix #ECM #CellBiology #CallForPapers #StructuralBiology [2/2]
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Jan Gebauer retweeted
Gave my plenary talk on our #biophotonic tools for #mechanobiology and #force #imaging at the DGBM @matrixbiology meeting in #Regensburg this morning. Such a welcoming and creative community. Thanks for your warm welcome! Not a #FridayThe13th experience at all 🤗
Have you already submitted your abstract for our annual #matrixbiology conference? Key dates: 📍Regensburg 🗓️Sept 11-13 ‼️ Abstract Deadline: July 22 🏆 check out matrixbiologie.de/annual-mee… for travel award applications @IntSocMatBio @THEmeshwork2020 @ExtracellMatrix
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AlphaFold3 reproduced and params/code released. 🤩
Technical Report of HelixFold3 for Biomolecular Structure Prediction The PaddleHelix research team at Baidu have released their AlphaFold3 replication under an open-source noncommercial license. Performance approaches that of AlphaFold3. abs: arxiv.org/abs/2408.16975 website: paddlehelix.baidu.com/ github: github.com/PaddlePaddle/Padd…
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Our first day is closed by Kay Diederichs—always a treat to hear such a well-versed expert in the field. What a brilliant first day of our meeting. 😍 Thanks to all the speakers—we couldn't name them all here. 😢 #StructuraLink2024
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Tomorrow starts the NRW-Meeting 2024 bringing together Structural Biologists from Cologne, Bochum and Düsseldorf for existing 2 days. It will be all about Structural Biology and we are grateful to host this years iteration! #StructuraLink2024 #StructuralBiology #Biochemistry
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The traditional funky ball tournament of the year. 4th semester vs teachers and senior students...#Biochemistry
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The students won 🤷
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Replying to @starkwatzinger
Was fassungslos macht, ist dass Sie den Autor:innen weiterhin vorwerfen, die Gewalt der Hamas auszublenden. Der Brief war kein Kommentar zum Konflikt in Isr/Pal, sondern zu Protest und Polizeieinsätzen auf deutschen Campussen. Es scheint, Sie wollen ihn geradezu missverstehen.
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Suprised to find out, that all the free software services for #mx @EMBLHamburg are now closed down (or only accessible from inside?). Have used the ArpWarp server often within my MX-courses 😟 Luckily ,we just bought new PCs, which are well capable of running ArpWarp 😮‍💨
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For clarity: I was refering to ArpWarp and such tools. (s*t*d X only allows short tweets for non-paying members 🙄) And again for clarity: I am greaful for all the years @EMBLHamburg provided the services 👍 was just surprised after so many years.
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First crystals incoming for this year's crystallisation course at the @C2fBiochemistry. It's only lysozyme but, they are always looking so beautiful 😍 #StructuralBiology
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OpenFold developed by @gahdritz, @NazimBouatta, and @MoAlQuraishi is a trainable, open-source implementation of AlphaFold2. It is fast and memory efficient, and the code and training data are available under a permissive license. nature.com/articles/s41592-0…
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The model has some good local arrangements but overall is far from the experimental structure.
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We love the excitement & results from the community on AlphaFold 3 and are doubling the AF Server daily job limit to 20. Happy to also share that we're working on releasing the AF3 model (incl weights) for academic use, which doesn’t depend on our research infra, within 6 months.
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We have an open postdoc position in the area of protein structural bioinformatics. Areas of interest include proteome-wide models, variant effect prediction, molecular evolution, allosteric regulation, protein/drug design. Deadline 20th July jobs.ethz.ch/job/view/JOPG_e…
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#AF3 has still problems with #ECM proteins. Below you see the best of 5 predictions for #COMP. The strange green circle in the middle are Ca2+ ions, which should be in the TSP repeats. Frankly, you could mock up a better model by just concatenating solved X-Ray structures. 🤷‍♂️
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There is no such thing as AlphaFold3. There is only alphafoldserver.com. The difference is throttling rigorous scientific and biomedical research.
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