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PlantomicsLab

@plantomics

We study how plants adapt and respond to the environment using genomics and systems biology. Based at @cgbumayor and part of @iBioChile

 Santiago, Chile
plantomicslab.wordpress.com/
Joined November 2018
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🔬Toda la delegación de nuestro centro presente en la XLVII Reunión Anual 2024 de la @SocBioquimica en La Serena, Chile. Ciencia, posters y grandes conversaciones.
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
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Starting the year on a high note! Delighted to have presented a portion of our work yesterday at @CbvUnab and excited to share more insights tomorrow at @ibiochile, focusing on dynamic and cell differentiation in the shoot apical meristem. Join us if you're in Santiago!
Image from Sebastián R. Moreno (@seba_moreno_r)
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Plantomics is attending the III Molecular Biosystems Conference #mbiosys23 in Puerto Varas, Chile! Great science in a beautiful venue!
Image from PlantomicsLab (@plantomics)
Image from PlantomicsLab (@plantomics)
Image from PlantomicsLab (@plantomics)
Image from PlantomicsLab (@plantomics)
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Espectacular trabajo colaborativo 🙌🏼 ¡Felicidades a todos los autores!
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We all know that I can tell time and I can sense glucose in the environment. But, I bet you didn't know that not only I can sense temperature, I can use my temperature response to make cool stuff! Nice work using me Larrondo lab! @lflarrondo journals.asm.org/doi/10.1128…

Developing a Temperature-Inducible Transcriptional Rheostat in Neurospora crassa | mBio

A timely and dynamic response to strong temperature fluctuations is paramount for organismal biology. At the same time, inducible promoters are a powerful tool for fungal biotechnological and...

journals.asm.org
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New review! With our colleagues & friends @NGPlab_UACh @AnitaarenasM @medinajoaquin1 @ibiochile @cgbumayor @InvestigaUMayor
NGPlab (@NGPlab_UACh) profile pictureNGPlab@NGPlab_UACh1 Feb 2023
Check out our new review paper about the LSU gene family in plants @IJMS_MDPI @plantomics @medinajoaquin1 mdpi.com/1422-0067/24/3/2819

A Revised View of the LSU Gene Family: New Functions in Plant Stress Responses and Phytohormone...

LSUs (RESPONSE TO LOW SULFUR) are plant-specific proteins of unknown function that were initially identified during transcriptomic studies of the sulfur deficiency response in Arabidopsis. Recent...

mdpi.com
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PlantomicsLab retweeted
Nicole (@Nico_Trefa) profile picture
Nicole@Nico_Trefa31 Jan 2023
We have an open 2-year postdoc position in marine microbial ecology and seaweed holobiont characterization as part of an exciting Millennium Nucleus @MilenioMASH @InvestigaUMayor @CentrosAnid @umayor_ Please feel free to RT!
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The Botrytis cinerea Gene Expression Browser (BEB) mdpi.com/2053688 #mdpijof via @JoF_MDPI #OpenSource tool 🖥️allowing visualization of global #GeneExpression 🧬 👉beb.canessalab.org Thanks to @aguayobq @iBioChile @CbvUnab
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TENEMOS EXCELENTES NOTICIAS 🥳🥳 Felicitaciones a @FcocubillosR por el premio científico joven de Bios Chile. Este premio es quizás el más importante y antiguo que se da en nuestro país a científicos de menos de 40 años. Desde el iBio le seguimos deseando el mayor de los éxitos🙌🏼
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
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📢¡Ya abrimos la convocatoria 2023 de nuestro concurso de Doctorado Nacional y queremos invitarles a participar! Cierre de postulaciones: 🗓️ miércoles 14 de diciembre de 2022. 🕰️ 13:00 horas. Revisas las bases y toda la información: anid.cl/concursos/concurso/?…
Image from Agencia Nacional de Investigación y Desarrollo (@ANID_Chile)
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🚨Atención con esta Información relevante acerca del congreso de nuestra Sociedad. 👀 Sigue el link! > drive.google.com/file/d/1xzG…
Image from Sociedad Chilena de Biología Vegetal (@Soc_Bio_Veg)
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Awesome paper from our dear friend and colleague @camoragaq ! Brumir is an innovative algorithm based on construction of de Brujin graphs to identify miRNAs from sRNA-seq data without the need of a genome assembly! Happy to participate and congratulations Carol ❤️!
Carol Moraga (@camoragaq) profile pictureCarol Moraga@camoragaq26 Oct 2022
Happy to share with you The #BrumiR manuscript at @GigaScience BrumiR can discover miRNAs directly from small RNA sequencing without mapping to any reference genome! Thanks to my fantastic co-authors&friends from @ErableInria @plantomics @ici_uoh academic.oup.com/gigascience…
BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data

BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data

Abstract. MicroRNAs (miRNAs) are small noncoding RNAs that are key players in the regulation of gene expression. In the past decade, with the increasing ac

academic.oup.com
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The end of PCR machines? Engineered helicase replaces thermocycler in DNA amplification while retaining desired PCR characteristics doi.org/10.1038/s41467-022-3…
Image from Olivier Borkowski (@O_Borkowski)
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PlantomicsLab retweeted
ShihLab (@LabShih) profile picture
ShihLab@LabShih24 Oct 2022
We are excited to share new work from our group at .@UCBerkeley. We characterized hundreds of plant transcription factors, that modulate gene expression to enrich gene regulatory networks. See thread for a summary. #transcription #plantsynbio #systemsbio tinyurl.com/z3nfm8x5
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‼️MAÑANA‼️ Estaremos en el Festival de las Ciencias en el Centro Cultural La Moneda. Esta actividad gratuita contará con diferentes instancias como charlas, talleres y exposiciones. Te esperamos en nuestro stand #4 en donde podrás conocer más acerca de nuestra labor 🔬
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
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¿Conoces nuestras líneas de investigación? 👀 Si no, te invitamos a darles un vistazo y a contarnos ¿Qué gustaría aprender más de cada una? ⏬️
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
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Have a look our new method for whole mount smFISH for quantitative analysis of transcript and protein levels at cellular resolution in plant tissues! Available now in @biorxivpreprint @lihuazhao4 @meschichi @SicardAdrien biorxiv.org/content/10.1101/…
Image from Alejandro Fonseca Cárdenas (@AFonseca_Card)
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PlantomicsLab retweeted
Ariel (@aherreravasquez) profile picture
Ariel@aherreravasquez3 Oct 2022
Our Paper "The TGA Transcription Factors from Clade II Negatively Regulate the Salicylic Acid Accumulation in Arabidopsis" by Fonseca et al. has been published! mdpi.com/1862578 #mdpiijms @IJMS_MDPI @MDPIOpenAccess (🧵)
The TGA Transcription Factors from Clade II Negatively Regulate the Salicylic Acid Accumulation in...

The TGA Transcription Factors from Clade II Negatively Regulate the Salicylic Acid Accumulation in...

Salicylic acid (SA) is a hormone that modulates plant defenses by inducing changes in gene expression. The mechanisms that control SA accumulation are essential for understanding the defensive...

mdpi.com
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‼️SÁBADO‼️ tendremos nuestro primer taller de la Escuela Ciencia y Cerveza 🍺😍🤤 Recuerda que puedes inscribirte y obtener más información enviando un email al correo indicado en el post.
Image from Instituto Milenio de Biología Integrativa 🌱 (@ibiochile)
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We can now plant over 700 near-single Arabidopsis seeds per plate with a modified Ender 3 (~$200) 3D printer, the AraPrinter. Next, we will combine the AraPrinter1.0 with the 3D printer-based imaging system, Imag3D, to track germination with high temporal resolution. Stay tuned.
Image from Alonso-Stepanova Lab (@AlonsoStepanova)
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